When timing is everything: Research says beneficial mutations need specific circumstances to win out
Christopher Marx, associate professor of organismic and evolutionary biology, says his study shows that while beneficial mutations may be more common than previously believed, they must occur within a limited window of opportunity to become successful. Ultimately, Marx said, the research casts important new light on the process of natural selection. Credit: Stephanie Mitchell/Harvard Staff Photographer
When it comes to the sort of beneficial mutations that drive natural selection, there's new evidence that, evolutionarily speaking, timing is everything.
In paper published in the March issue of Genetics, Christopher Marx, associate professor of organismic and evolutionary biology, says that beneficial mutations may occur more often than first thought, but many never emerge as "winners," because they don't fall within the narrow set of circumstances required for them to dominate a population.
"Remarkably, it's just not that hard to improve. But the trick is that it's not good enough to just be good," Marx said. "Any particular mutation being a winner is unlikely because it has a number of battles to face to avoid being wiped out. It's pretty cutthroat."
Interestingly, Marx hadn't set out to study these intra-population struggles.
His original goal was to study how Methylobacterium extorquens, a bacterium known for eating methanol and excreting formaldehyde, developed its unusual behavior. To examine that question, Marx began by genetically altering the bacteria to replace the normal metabolic pathway with a new one.
The foreign pathway, however, put too much strain on the organisms, forcing them to evolve ways of reducing that burden, including by decreasing the expression of the new genetic pathway or by reducing the number of copies of the new genes.
It was the third strategy, however, that caught Marx's attention. To insert the new metabolic machinery into the bacteria, he expressed them from a plasmid—a sort of free-floating chromosome—that is present in 10 copies for each bacterial cell. In some cases, the beneficial mutations occurred by recombining this introduced plasmid into the bacterium's normal chromosomes, thereby essentially co-opting the new genetic material into its own.
"This happens in nature all the time. Genes get passed around on plasmids like this," Marx said. "In the long term, if you're going to stick around, you can't be standing in the foyer with your coat on, you have to get into the house. You have to get into the chromosome if you're going to remain for a longer period of time, and we actually saw it happen." In fact, Marx said, researchers saw the mutation occur many times, in multiple strains of bacteria.
In one case, he said, the mutation occurred 17 times in the same population, yet none of these ever went on to dominate the population. Of the eight populations examined in the paper, the type of mutation that brought the plasmid into the chromosome emerged as the most successful evolutionary strategy only three times.
Though the mutation resulted in as much as a 20 percent increase in fitness, Marx said it simply wasn't enough in some cases.
"The fact that this mutation happened was not good enough; these populations were improving so fast due to so many other large-benefit mutations" Marx said. "In some populations, they managed to emerge early on. In others, they occurred later. Either way, there were always multiple similar mutations of this sort rising together in a single wave."
The results, Marx said, highlight the fact that while beneficial mutations may be more common than previously believed, they must occur within a limited window of opportunity to become successful.
"This strategy is only one of several ways of turning down the expression of those genes," Marx explained. "Once you fix that problem, it's no longer an issue. In some of these other strains, the bacteria used another mutation to turn down that expression, so it wouldn't benefit from integrating the plasmid into the chromosome. Usually, another type of mutation turning down this foreign pathway won out."
In other cases, he said, the mutation's success depended on whether it was able to work in a complementary fashion with other, earlier mutations. If the mutations were able to work as a team, the chance for success increased. If the mutation occurred too early or too late, however, it wouldn't succeed.
Ultimately, Marx said, the research casts important new light on the process of natural selection by demonstrating that the sorts of mutations that were once thought to be relatively rare may happen quite often. On the other hand, they can be simply wiped out by other evolutionary forces.
"We have a poor idea of how many things were good enough to get a start, but never got far enough to win," Marx said. "There could easily be hundreds, or even thousands, of beneficial mutations that can occur in a population of a billion bacteria in less than a tablespoon of liquid, but we only tend to find the one eventual winner. Because of the unusual nature of this type of mutation, it became easy for us to find them, distinguish independent events that occurred in the same population, and thus understand that these mutations are more common than we thought."
Journal reference: Genetics
Provided by Harvard University
- It doesn't add up Jun 03, 2011 | not rated yet | 0
- Evolutionary biology experiment may one day help with chronic diseases Jun 02, 2011 | not rated yet | 0
- Bacterial resistance to antibiotics: The more they resist, the more they divide Jul 28, 2011 | not rated yet | 0
- Influenza virus: Being the most beneficial mutation is no guarantee of long-term genetic success, research finds Jan 03, 2013 | not rated yet | 0
- Evolutionary kings of the hill use good, bad and ugly mutations to speed ahead of competition Jun 30, 2011 | not rated yet | 0
- Motion perception revisited: High Phi effect challenges established motion perception assumptions Apr 23, 2013 | 3 / 5 (2) | 2
- Anything you can do I can do better: Neuromolecular foundations of the superiority illusion (Update) Apr 02, 2013 | 4.5 / 5 (11) | 5
- The visual system as economist: Neural resource allocation in visual adaptation Mar 30, 2013 | 5 / 5 (2) | 9
- Separate lives: Neuronal and organismal lifespans decoupled Mar 27, 2013 | 4.9 / 5 (8) | 0
- Sizing things up: The evolutionary neurobiology of scale invariance Feb 28, 2013 | 4.8 / 5 (10) | 14
Classical and Quantum Mechanics via Lie algebras
Apr 15, 2011 I'd like to open a discussion thread for version 2 of the draft of my book ''Classical and Quantum Mechanics via Lie algebras'', available online at http://lanl.arxiv.org/abs/0810.1019 , and for the...
- More from Physics Forums - Independent Research
More news stories
Researchers from Queen Mary, University of London have led the largest sequencing study of human disease to date, investigating the genetic basis of six autoimmune diseases.
Genetics May 22, 2013 | 4.5 / 5 (4) | 0 |
University of Minnesota Medical School researchers from the Masonic Cancer Center, University of Minnesota, in partnership with the University's Brain Tumor Program, have developed a new mouse model of malignant peripheral ...
Genetics May 20, 2013 | 5 / 5 (1) | 0 |
Northwestern University scientists have shown a gene involved in neurodegenerative disease also plays a critical role in the proper function of the circadian clock.
Genetics May 16, 2013 | 3 / 5 (1) | 1 |
Informed consent is the backbone of patient care. Genetic testing has long required patient consent and patients have had a "right not to know" the results. However, as 21st century medicine now begins to use the tools of ...
Genetics May 16, 2013 | 5 / 5 (1) | 3 |
Ethicists provide framework supporting new recommendations on reporting incidental findings in gene sequencing
In a paper published in Science Express, a group of experts led by bioethicists in the Center for Medical Ethics and Health Policy at Baylor College of Medicine provide a framework for the new American College of Medical Geneti ...
Genetics May 16, 2013 | not rated yet | 0
(Medical Xpress)—Regulating the distribution of power in neurons is done by a system that makes the national electric grid look simple by comparison. Each neuron has several thousand mitochondria confined ...
9 hours ago | 4.8 / 5 (5) | 0 |
A brief visual task can predict IQ, according to a new study. This surprisingly simple exercise measures the brain's unconscious ability to filter out visual movement. The study shows that individuals whose ...
14 hours ago | 4.4 / 5 (9) | 0 |
Teams of highly respected Alzheimer's researchers failed to replicate what appeared to be breakthrough results for the treatment of this brain disease when they were published last year in the journal Science.
12 hours ago | 5 / 5 (1) | 2 |
Scientists at the National Institutes of Health report they have discovered in mouse studies that a small molecule released in the spinal cord triggers a process that is later experienced in the brain as ...
12 hours ago | 5 / 5 (2) | 0 |
Little is known about why asthma develops, how it constricts the airway or why response to treatments varies between patients. Now, a team of researchers at Weill Cornell Medical College, Columbia University Medical Center ...
13 hours ago | not rated yet | 0 |
Ethnic background plays a surprisingly large role in how diabetes develops on a cellular level, according to two new studies led by researchers at the Stanford University School of Medicine.
10 hours ago | not rated yet | 0 |