Virtual immune system roadmap unveiled

Virtual immune system roadmap unveiled
The construction and use of a digital twin. At each relevant physiological scale, known biology and relevant mechanisms are characterized through data collection that informs one or more computational models. The models at the individual scales are then integrated into a comprehensive multiscale base model. In the second step, this base model is personalized by parameterizing it with data collected from an individual patient. The resulting digital twin can then be used for clinical decision-making for this patient. (The images are public domain images from Servier Medical Art (https://smart.servier.com/smart_image/tendon-anatomy/), https://all-free-download.com/free-vector/flat-screen-computer-monitor.html, and https://pixabay.com/vectors/man-male-boy-human-people-persons-2099114/). All other images were produced by the authors). Credit: npj Digital Medicine (2022). DOI: 10.1038/s41746-022-00610-z

An article published May 20 in npj Digital Medicine provides a step-by-step plan for an international effort to create a digital twin of the human immune system.

"This paper outlines a road map that the should take in building, developing and applying a digital twin of the immune system," said Tomas Helikar, a University of Nebraska–Lincoln biochemist who is one of 10 co-authors from six universities from around the world.

"This is an effort that will require the collaboration of computational biologists, immunologists, clinicians, mathematicians and computer scientists," he said. "Trying to break down this complexity down into measurable and achievable steps has been a challenge. This paper is addressing that."

A digital twin of the immune system would be a breakthrough that could offer for a wide array of ailments, including cancer, autoimmune disease and viral infections like COVID-19.

Helikar's involvement has been inspired in part by his seven-year-old son, who required a lung transplant as an infant. This has resulted in a life-long careful balancing of his immune system through powerful immunosuppression drugs to prevent organ rejection while keeping infections and other diseases at bay.

While the first step is to create a generic model that reflects common biological mechanisms, the eventual goal is to make virtual models at the individual level. That would enable doctors to deliver medicine precisely designed for the individual.

"The dream and goal are for it to be used for precision medicine at the level of an individual," Helikar said. "Importantly, we change over time. Our immune system is programmed, reprogrammed and tweaked over time. It develops from birth and as we get older, it continues developing, often in ways we don't like. It becomes weaker, we have cancers and our immune system is not keeping up. Our goal is to create digital twins that are not just specific to ourselves, but specific to that point in time—taking into consideration all of our past."

The authors of "Building Digital Twins of the Human Immune System: Toward a Roadmap" are part of an umbrella working group of about 200 scientists organized for multiscale modeling of viral pandemics. The inter-agency working group is led by Reinhard Laubenbacher of the University of Florida and James Glazier of Indiana University, both co-authors of the May 20 report. Since May, Helikar has been co-leading the working group with Glazier.

Other co-authors include Gary An of the University of Vermont, Anna Niakaris of Université Paris-Saclay, and Rahuman S. Malik Sheriff of the European Bioinformatics Institute.

"Digital twins, customized simulation models pioneered in industry, are beginning to be deployed in medicine and healthcare, with some major successes in cardiovascular diagnostics and in insulin pump control," the article says. "More advanced medical digital twins will be essential to making precision medicine a reality. Because the immune system plays an important role in such a wide range of diseases and , from fighting pathogens to , digital twins of the immune system will have especially high impact."

While the quest could take years and hundreds of millions of dollars, Hellikar believes it is achievable.

"I think we have enough data and in terms of methods and software tools, that the first draft or first version of the virtual could be built with data that already exists. It may not be personalizable yet, but you could start with it as a working prototype."

Helikar is committed to completing the project.

"As long as there's a possibility that this can be done, if it can help my son, that's my mission," he said.


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More information: R. Laubenbacher et al, Building digital twins of the human immune system: toward a roadmap, npj Digital Medicine (2022). DOI: 10.1038/s41746-022-00610-z
Citation: Virtual immune system roadmap unveiled (2022, May 20) retrieved 4 July 2022 from https://medicalxpress.com/news/2022-05-virtual-immune-roadmap-unveiled.html
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